Daniel Griffith
Program: Computational and Systems Biology
Current advisor: Alex Holehouse, PhD
Undergraduate university: University of Wisconsin-Madison, 2019
Enrollment year: 2019
Research summary
Understanding the relationship between intrinsically disordered protein sequence and function.
Graduate publications
Griffith D, Holehouse AS. 2021 PARROT is a flexible recurrent neural network framework for analysis of large protein datasets. Elife, ():e70576.
Holehouse AS, Ginell GM, Griffith D, Böke E. 2021 Clustering of Aromatic Residues in Prion-like Domains Can Tune the Formation, State, and Organization of Biomolecular Condensates. Biochemistry, 60(47):3566-81.
Emenecker RJ, Griffith D, Holehouse AS. 2021 Metapredict: a fast, accurate, and easy-to-use predictor of consensus disorder and structure. Biophys J, 120(20):4312-19.
Cubuk J, Alston JJ, Incicco JJ, Singh S, Stuchell-Brereton MD, Ward MD, Zimmerman MI, Vithani N, Griffith D, Wagoner JA, Bowman GR, Hall KB, Soranno A, Holehouse AS. 2021 The SARS-CoV-2 nucleocapsid protein is dynamic, disordered, and phase separates with RNA. Nat Commun, 12(1):1936.