Computational and Systems Biology
Ji-Sun Kwon
Program: Computational and Systems Biology
Graduation Year: 2025
Thesis Advisor: Andrew Yoo
Thesis Title: The Role of a lincRNA in Huntington’s Disease Neurodegeneration in Directly Reprogrammed Patient Neurons
Nicolette Laird
Program: Computational and Systems Biology
Graduation Year: 2022
Thesis Advisor: Zachary Pincus
Thesis Title: Techniques for Spatial Analysis of C. elegans Anatomy and Reporter Expression
Dylan Lawrence
Program: Computational and Systems Biology
Graduation Year: 2022
Thesis Advisor: Megan T. Baldridge
Thesis Title: Single-cell analysis of the human intestinal microbiota by flow cytometry
Jiayue Liu
Program: Computational and Systems Biology
Graduation Year: 2021
Thesis Advisor: Robi D. Mitra
Thesis Title: Regulation of transcription factor binding specificity: From binding motifs to local DNA context
Kaiser Loell
Program: Computational and Systems Biology
Graduation Year: 2023
Thesis Advisor: Barak A. Cohen
Thesis Title: Biophysically-informed Models of Heterogeneity in Transcription Factor Activity
Juan Macias
Program: Computational and Systems Biology
Graduation Year: 2022
Thesis Advisor: Heather A. Lawson
Thesis Title: Genetic Effects Mediated Through Epistatic Networks Onto Metabolic Traits
Brett Maricque
Program: Computational and Systems Biology
Graduation Year: 2016
Thesis Advisor: Barak A. Cohen
Thesis Title: A study of local and regional gene regulatory features in the human genome
Mati Nemera
Program: Computational and Systems Biology
Graduation Year: 2024
Thesis Advisor: Harrison W. Gabel
Thesis Title: Understanding Gene Regulation by Non-CG DNA Methylation and MeCP2 at Cellular Resolution in the Brain
Igor Nikolskiy
Program: Computational and Systems Biology
Graduation Year: 2014
Thesis Advisor: Gary J. Patti
Thesis Title: Computational Tools to Expand the Coverage of Metabolite Profiling via LC-MS/MS
Manishi Pandey
Program: Computational and Systems Biology
Graduation Year: 2019
Thesis Advisor: Gary D. Stormo
Thesis Title: Systematic Investigation of Alternative Splicing and Conserved Spliceosome Factors in Chlamydomonas reinhardtii